Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3n-3A0A0G2JEM0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm6222-201ENSMUST00000120787 396 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rprl2-201ENSMUST00000157150 290 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms