Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Dupd1-202ENSMUST00000224735 548 ntBASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm27533-201ENSMUST00000183800 152 ntBASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm44344-201ENSMUST00000200287 129 ntBASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm6888-201ENSMUST00000221983 706 ntBASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav6n-6A0A075B6B2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.82□□□□□ -0.84
Trav6n-6A0A075B6B2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms