Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Gm9103-201ENSMUST00000119371 405 ntBASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav8-1A0A075B641 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav8-1A0A075B641 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm16198-201ENSMUST00000118766 670 ntBASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav8-1A0A075B641 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms