Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Syt7-205ENSMUST00000224135 1557 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gm27306-201ENSMUST00000183970 107 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
H2afb3S4R1G7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm12485-201ENSMUST00000119641 291 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm9522-201ENSMUST00000182394 926 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Mir7221-201ENSMUST00000184009 72 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm38144-201ENSMUST00000192790 465 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm20445-201ENSMUST00000061905 565 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm5161-201ENSMUST00000075243 853 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Gm24447-201ENSMUST00000083977 338 ntBASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H2afb3S4R1G7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms