Protein–RNA interactions for Protein: Q9QZS0

Col4a3, Collagen alpha-3(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3Q9QZS0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gm31256-201ENSMUST00000194705 506 ntBASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gm37466-201ENSMUST00000195692 652 ntBASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.02□□□□□ -0.16
Col4a3Q9QZS0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.02□□□□□ -0.17
Col4a3Q9QZS0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm13315-201ENSMUST00000120376 991 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Mir874-201ENSMUST00000104769 76 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm14208-201ENSMUST00000119645 678 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm13813-201ENSMUST00000120998 787 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm11597-201ENSMUST00000121423 964 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a3Q9QZS0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a3Q9QZS0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a3Q9QZS0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a3Q9QZS0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a3Q9QZS0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a3Q9QZS0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col4a3Q9QZS0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a3Q9QZS0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms