Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm12208-201ENSMUST00000122004 163 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm18730-201ENSMUST00000218038 343 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-4Q9EQM3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm17040-202ENSMUST00000170597 889 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm19459-201ENSMUST00000176240 835 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm9555-201ENSMUST00000200908 583 ntBASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx2-4Q9EQM3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-4Q9EQM3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms