Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp2aQ9DB34 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Mir1894-201ENSMUST00000122802 81 ntBASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Gm18473-201ENSMUST00000220543 868 ntBASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp2aQ9DB34 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Gm6447-201ENSMUST00000118905 835 ntBASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Gm17794-201ENSMUST00000220252 955 ntBASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms