Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm27331-201ENSMUST00000183705 60 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm29127-201ENSMUST00000188304 517 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm25857-201ENSMUST00000082788 129 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Mir7221-201ENSMUST00000184009 72 ntBASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Gm29705-201ENSMUST00000212598 474 ntBASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ssmem1Q9D9Y8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Gm4271-201ENSMUST00000174444 973 ntBASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Gm37497-201ENSMUST00000195830 798 ntBASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ssmem1Q9D9Y8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms