Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Mir7221-201ENSMUST00000184009 72 ntBASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gm8515-201ENSMUST00000194852 576 ntBASIC14.47□□□□□ -0.09
Cfap53Q9D439 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.47□□□□□ -0.09
Cfap53Q9D439 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.47□□□□□ -0.09
Cfap53Q9D439 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cfap53Q9D439 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap53Q9D439 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Gm12091-201ENSMUST00000146791 830 ntBASIC14.46□□□□□ -0.09
Cfap53Q9D439 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.46□□□□□ -0.09
Cfap53Q9D439 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.46□□□□□ -0.09
Cfap53Q9D439 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.46□□□□□ -0.09
Cfap53Q9D439 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cfap53Q9D439 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cfap53Q9D439 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.45□□□□□ -0.1
Cfap53Q9D439 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.45□□□□□ -0.1
Cfap53Q9D439 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cfap53Q9D439 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms