Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx56Q9D0R4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Gm8463-201ENSMUST00000208573 613 ntBASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ddx56Q9D0R4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.85□□□□□ -0.19
Ddx56Q9D0R4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Gm14350-201ENSMUST00000116642 640 ntBASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.84□□□□□ -0.19
Ddx56Q9D0R4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms