Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Grk6-205ENSMUST00000224653 2976 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm27682-201ENSMUST00000183930 110 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm37497-201ENSMUST00000195830 798 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gm43974-201ENSMUST00000205080 684 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.49□□□□□ -0.41
Otud1Q9CUB6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Otud1Q9CUB6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm23931-201ENSMUST00000103842 109 ntBASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm1335-201ENSMUST00000121653 386 ntBASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.48□□□□□ -0.41
Otud1Q9CUB6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.48□□□□□ -0.41
Otud1Q9CUB6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Otud1Q9CUB6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms