Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ska1Q9CPV1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.46□□□□□ -0.41
Ska1Q9CPV1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ska1Q9CPV1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ska1Q9CPV1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.45□□□□□ -0.42
Ska1Q9CPV1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms