Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim34aQ99PP6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Gm5904-201ENSMUST00000210286 865 ntBASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim34aQ99PP6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Gm14704-201ENSMUST00000120300 874 ntBASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Gm31256-201ENSMUST00000194705 506 ntBASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim34aQ99PP6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Gm12997-201ENSMUST00000120207 640 ntBASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.16■□□□□ 0.18
Trim34aQ99PP6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Gm8099-201ENSMUST00000200510 742 ntBASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim34aQ99PP6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms