Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Gm18038-201ENSMUST00000197900 485 ntBASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm12501-201ENSMUST00000119163 529 ntBASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.05□□□□□ -0.32
Cdh23Q99PF4 Gm7851-201ENSMUST00000117574 323 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm28071-201ENSMUST00000190355 478 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm9139-201ENSMUST00000218817 700 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Mir1956-201ENSMUST00000157748 65 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm44980-201ENSMUST00000205826 314 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh23Q99PF4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm5733-201ENSMUST00000190232 939 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm2517-201ENSMUST00000215651 348 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm11451-201ENSMUST00000118946 630 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm13492-201ENSMUST00000119772 665 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms