Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Rubie-203ENSMUST00000227803 2430 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.57□□□□□ -0.56
Scrt1Q99M85 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.57□□□□□ -0.56
Scrt1Q99M85 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm22323-201ENSMUST00000103832 109 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm15370-201ENSMUST00000117158 253 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm2383-201ENSMUST00000181461 807 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm6082-201ENSMUST00000215204 454 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.56□□□□□ -0.56
Scrt1Q99M85 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.56□□□□□ -0.56
Scrt1Q99M85 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm5687-201ENSMUST00000118252 640 ntBASIC11.55□□□□□ -0.56
Scrt1Q99M85 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.55□□□□□ -0.56
Scrt1Q99M85 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms