Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp1b1Q99LU0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm19220-201ENSMUST00000222682 803 ntBASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chmp1b1Q99LU0 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gm12859-201ENSMUST00000117834 427 ntBASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms