Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.84□□□□□ -0.19
Clp1Q99LI9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clp1Q99LI9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clp1Q99LI9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clp1Q99LI9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clp1Q99LI9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Clp1Q99LI9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clp1Q99LI9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Gm12058-201ENSMUST00000118614 437 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 Gm14208-201ENSMUST00000119645 678 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 Gm42997-202ENSMUST00000200321 985 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.83□□□□□ -0.2
Clp1Q99LI9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.83□□□□□ -0.2
Clp1Q99LI9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clp1Q99LI9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm44405-201ENSMUST00000198952 126 ntBASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm43947-201ENSMUST00000203019 959 ntBASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clp1Q99LI9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms