Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb18Q91Y02 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb18Q91Y02 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb18Q91Y02 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb18Q91Y02 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb18Q91Y02 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Gm12241-201ENSMUST00000118330 726 ntBASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Olfr284-202ENSMUST00000206647 966 ntBASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb18Q91Y02 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb18Q91Y02 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb18Q91Y02 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhb18Q91Y02 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb18Q91Y02 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Gm10608-202ENSMUST00000213924 676 ntBASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb18Q91Y02 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Gm6447-201ENSMUST00000118905 835 ntBASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdhb18Q91Y02 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms