Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Gm11222-201ENSMUST00000119005 738 ntBASIC13.02□□□□□ -0.33
Vsx1Q91V10 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.02□□□□□ -0.33
Vsx1Q91V10 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Mir7032-201ENSMUST00000185154 79 ntBASIC13.02□□□□□ -0.33
Vsx1Q91V10 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.02□□□□□ -0.33
Vsx1Q91V10 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx1Q91V10 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Gm14028-201ENSMUST00000117434 479 ntBASIC13.01□□□□□ -0.33
Vsx1Q91V10 Gm2231-201ENSMUST00000125661 612 ntBASIC13.01□□□□□ -0.33
Vsx1Q91V10 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.01□□□□□ -0.33
Vsx1Q91V10 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.01□□□□□ -0.33
Vsx1Q91V10 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.01□□□□□ -0.33
Vsx1Q91V10 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx1Q91V10 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Vsx1Q91V10 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13□□□□□ -0.33
Vsx1Q91V10 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 Gm12363-201ENSMUST00000122250 668 ntBASIC13□□□□□ -0.33
Vsx1Q91V10 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Gm34767-201ENSMUST00000191813 1062 ntBASIC13□□□□□ -0.33
Vsx1Q91V10 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 AC154595.3-201ENSMUST00000224579 384 ntBASIC13□□□□□ -0.33
Vsx1Q91V10 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms