Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm9358-201ENSMUST00000183067 927 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm37028-201ENSMUST00000194276 107 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 Mir8115-201ENSMUST00000184992 119 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm44958-201ENSMUST00000203734 736 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm6905-201ENSMUST00000205729 511 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm4157-201ENSMUST00000211647 679 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.24■□□□□ 0.03
StrcQ8VIM6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
StrcQ8VIM6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.23■□□□□ 0.03
StrcQ8VIM6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gm29155-201ENSMUST00000185910 269 ntBASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.23■□□□□ 0.03
StrcQ8VIM6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.23■□□□□ 0.03
StrcQ8VIM6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.23■□□□□ 0.03
StrcQ8VIM6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.23■□□□□ 0.03
StrcQ8VIM6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
StrcQ8VIM6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.22■□□□□ 0.03
StrcQ8VIM6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.22■□□□□ 0.03
StrcQ8VIM6 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.22■□□□□ 0.03
StrcQ8VIM6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
StrcQ8VIM6 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms