Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm8099-201ENSMUST00000200510 742 ntBASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TraipQ8VIG6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.02□□□□□ -0.16
TraipQ8VIG6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.02□□□□□ -0.16
TraipQ8VIG6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.02□□□□□ -0.16
TraipQ8VIG6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.02□□□□□ -0.16
TraipQ8VIG6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Gm13297-201ENSMUST00000120205 934 ntBASIC14.02□□□□□ -0.17
TraipQ8VIG6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Gm9368-201ENSMUST00000219348 831 ntBASIC14.02□□□□□ -0.17
TraipQ8VIG6 Gm9257-201ENSMUST00000221254 232 ntBASIC14.02□□□□□ -0.17
TraipQ8VIG6 Gm8227-201ENSMUST00000223306 571 ntBASIC14.02□□□□□ -0.17
TraipQ8VIG6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TraipQ8VIG6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TraipQ8VIG6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.01□□□□□ -0.17
TraipQ8VIG6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.01□□□□□ -0.17
TraipQ8VIG6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm12241-201ENSMUST00000118330 726 ntBASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.01□□□□□ -0.17
TraipQ8VIG6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Mospd4-201ENSMUST00000180618 576 ntBASIC14.01□□□□□ -0.17
TraipQ8VIG6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TraipQ8VIG6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms