Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm19078-201ENSMUST00000206311 727 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm20445-201ENSMUST00000061905 565 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.63□□□□□ -0.23
Trim60Q8VI40 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.63□□□□□ -0.23
Trim60Q8VI40 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Gm44872-201ENSMUST00000207864 420 ntBASIC13.63□□□□□ -0.23
Trim60Q8VI40 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.63□□□□□ -0.23
Trim60Q8VI40 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim60Q8VI40 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.62□□□□□ -0.23
Trim60Q8VI40 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.62□□□□□ -0.23
Trim60Q8VI40 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.62□□□□□ -0.23
Trim60Q8VI40 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim60Q8VI40 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms