Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gm15770-201ENSMUST00000117498 584 ntBASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gm38225-201ENSMUST00000194001 393 ntBASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gm18206-201ENSMUST00000207027 926 ntBASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gm13015-201ENSMUST00000118674 204 ntBASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf4Q8K4J2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms