Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynpoQ8CC35 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.77□□□□□ -0.36
SynpoQ8CC35 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynpoQ8CC35 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Mir698-201ENSMUST00000102164 109 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gm11425-201ENSMUST00000119608 498 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gm15376-201ENSMUST00000122258 783 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Mir7085-201ENSMUST00000184353 66 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gm9396-201ENSMUST00000076703 567 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.77□□□□□ -0.37
SynpoQ8CC35 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.77□□□□□ -0.37
SynpoQ8CC35 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynpoQ8CC35 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gm12928-201ENSMUST00000117115 573 ntBASIC12.76□□□□□ -0.37
SynpoQ8CC35 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.76□□□□□ -0.37
SynpoQ8CC35 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gm2495-201ENSMUST00000191160 466 ntBASIC12.76□□□□□ -0.37
SynpoQ8CC35 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.76□□□□□ -0.37
SynpoQ8CC35 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.76□□□□□ -0.37
SynpoQ8CC35 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SynpoQ8CC35 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SynpoQ8CC35 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SynpoQ8CC35 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SynpoQ8CC35 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SynpoQ8CC35 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SynpoQ8CC35 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms