Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Gm13123-201ENSMUST00000122173 492 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Gm22331-201ENSMUST00000158066 136 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Gm17150-201ENSMUST00000165577 381 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.79■□□□□ 0.28
Ccdc60Q8C4J0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gm13369-201ENSMUST00000119442 987 ntBASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gm19931-201ENSMUST00000198920 368 ntBASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc60Q8C4J0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Gm24644-201ENSMUST00000157114 139 ntBASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc60Q8C4J0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc60Q8C4J0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms