Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptcd1Q8C2E4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Gm2260-201ENSMUST00000184965 657 ntBASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ptcd1Q8C2E4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ptcd1Q8C2E4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ptcd1Q8C2E4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ptcd1Q8C2E4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Gm14726-201ENSMUST00000120623 896 ntBASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Gm16479-201ENSMUST00000121706 932 ntBASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Gm18212-201ENSMUST00000211678 889 ntBASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Gm5781-201ENSMUST00000219792 443 ntBASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptcd1Q8C2E4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm4909-201ENSMUST00000118749 794 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm26185-201ENSMUST00000157692 266 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm18584-201ENSMUST00000203098 964 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gm19208-201ENSMUST00000213861 912 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ptcd1Q8C2E4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms