Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm16215-201ENSMUST00000161990 637 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm43094-201ENSMUST00000196549 921 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm17330-201ENSMUST00000221047 165 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsfm13Q8BXS2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsfm13Q8BXS2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms