Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm22619-201ENSMUST00000179516 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm25255-201ENSMUST00000179579 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm24755-201ENSMUST00000179691 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm26506-201ENSMUST00000179692 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm25086-201ENSMUST00000179931 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm23243-201ENSMUST00000180047 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm24659-201ENSMUST00000180212 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm24169-201ENSMUST00000180244 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm23689-201ENSMUST00000180354 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm27359-201ENSMUST00000184153 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm27785-201ENSMUST00000184268 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm27466-201ENSMUST00000184396 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm27703-201ENSMUST00000184836 110 ntBASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lsm11Q8BUV6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gm14579-201ENSMUST00000117068 283 ntBASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gm45841-201ENSMUST00000207700 164 ntBASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Prl7a1-203ENSMUST00000224852 1283 ntBASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 AC154616.1-201ENSMUST00000226995 804 ntBASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Gm8872-201ENSMUST00000197475 1341 ntBASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lsm11Q8BUV6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lsm11Q8BUV6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 147 ms