Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Gm27682-201ENSMUST00000183930 110 ntBASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup54Q8BTS4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm11637-201ENSMUST00000120601 592 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm1335-201ENSMUST00000121653 386 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm16479-201ENSMUST00000121706 932 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm26927-201ENSMUST00000182385 965 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nup54Q8BTS4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Gm7029-201ENSMUST00000173226 450 ntBASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.46□□□□□ -0.25
Nup54Q8BTS4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms