Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Gm24845-201ENSMUST00000158034 109 ntBASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Gm28388-201ENSMUST00000186262 437 ntBASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.86□□□□□ -0.67
Smg1Q8BKX6 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smg1Q8BKX6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Mir181d-201ENSMUST00000102383 72 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Gm9111-201ENSMUST00000219394 709 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Gm15881-201ENSMUST00000148792 942 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smg1Q8BKX6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.85□□□□□ -0.67
Smg1Q8BKX6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm6630-201ENSMUST00000119199 454 ntBASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm12502-201ENSMUST00000120197 444 ntBASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm3793-201ENSMUST00000204973 672 ntBASIC10.84□□□□□ -0.67
Smg1Q8BKX6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.84□□□□□ -0.67
Smg1Q8BKX6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms