Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp8Q80U87 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp8Q80U87 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm15487-201ENSMUST00000122373 465 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm9522-201ENSMUST00000182394 926 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Mir8102-201ENSMUST00000184148 139 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm27989-201ENSMUST00000184721 107 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm27838-201ENSMUST00000184829 128 ntBASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp8Q80U87 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp8Q80U87 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm21854-201ENSMUST00000179901 471 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm20445-201ENSMUST00000061905 565 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.22□□□□□ -0.29
Usp8Q80U87 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Usp8Q80U87 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp8Q80U87 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp8Q80U87 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms