Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Prpf38bQ80SY5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Prpf38bQ80SY5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Gm20482-202ENSMUST00000174729 825 ntBASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Prpf38bQ80SY5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm10156-201ENSMUST00000122364 462 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm4271-201ENSMUST00000174444 973 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm27682-201ENSMUST00000183930 110 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Gm27772-201ENSMUST00000184900 187 ntBASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf38bQ80SY5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gm18027-201ENSMUST00000218947 619 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms