Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdp1Q7TSG2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdp1Q7TSG2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gm27437-201ENSMUST00000183429 107 ntBASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdp1Q7TSG2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdp1Q7TSG2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms