Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Nsd1-205ENSMUST00000224693 852 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm7003-201ENSMUST00000195089 312 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm42937-201ENSMUST00000197360 752 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Gm19208-201ENSMUST00000213861 912 ntBASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd4Q6PDQ2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Mir5132-201ENSMUST00000175166 71 ntBASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm11930-201ENSMUST00000117788 190 ntBASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm13296-201ENSMUST00000117854 997 ntBASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm9555-201ENSMUST00000200908 583 ntBASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd4Q6PDQ2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd4Q6PDQ2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms