Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd3Q6P9Z1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gm13223-201ENSMUST00000118609 747 ntBASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd3Q6P9Z1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcd3Q6P9Z1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Mir6956-201ENSMUST00000183598 62 ntBASIC12.08□□□□□ -0.48
Smarcd3Q6P9Z1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms