Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Gm15459-201ENSMUST00000117405 1941 ntBASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Gm8355-201ENSMUST00000177767 1941 ntBASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Gm43916-201ENSMUST00000205062 967 ntBASIC19.9■□□□□ 0.78
Slx4Q6P1D7 AC163667.3-201ENSMUST00000225774 222 ntBASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Gm13812-201ENSMUST00000118061 1347 ntBASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Gm13810-201ENSMUST00000118584 1347 ntBASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC19.9■□□□□ 0.78
Slx4Q6P1D7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Gm13315-201ENSMUST00000120376 991 ntBASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slx4Q6P1D7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Gm8494-201ENSMUST00000178171 1233 ntBASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Slx4Q6P1D7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Mir680-2-201ENSMUST00000102163 110 ntBASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Gm23251-201ENSMUST00000103773 110 ntBASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Gm6781-201ENSMUST00000038304 1242 ntBASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Mir339-201ENSMUST00000083659 96 ntBASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slx4Q6P1D7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slx4Q6P1D7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slx4Q6P1D7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slx4Q6P1D7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slx4Q6P1D7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms