Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gm12390-201ENSMUST00000117897 397 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gm8213-201ENSMUST00000118191 441 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gm15824-201ENSMUST00000119516 955 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gm22331-201ENSMUST00000158066 136 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.92□□□□□ -0.18
Scube3Q66PY1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Scube3Q66PY1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm29649-201ENSMUST00000185649 419 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm44069-201ENSMUST00000204898 506 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Gm16372-201ENSMUST00000073088 450 ntBASIC13.91□□□□□ -0.18
Scube3Q66PY1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scube3Q66PY1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scube3Q66PY1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Gm4984-201ENSMUST00000115987 360 ntBASIC13.9□□□□□ -0.18
Scube3Q66PY1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.9□□□□□ -0.18
Scube3Q66PY1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scube3Q66PY1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms