Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Trim27Q62158 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim27Q62158 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim27Q62158 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim27Q62158 Gm11618-201ENSMUST00000117946 267 ntBASIC16.15■□□□□ 0.18
Trim27Q62158 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim27Q62158 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim27Q62158 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim27Q62158 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim27Q62158 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
Trim27Q62158 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim27Q62158 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.14■□□□□ 0.17
Trim27Q62158 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim27Q62158 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim27Q62158 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim27Q62158 Gm24196-201ENSMUST00000179161 110 ntBASIC16.14■□□□□ 0.17
Trim27Q62158 Gm8652-201ENSMUST00000181363 964 ntBASIC16.14■□□□□ 0.17
Trim27Q62158 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.14■□□□□ 0.17
Trim27Q62158 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim27Q62158 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim27Q62158 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trim27Q62158 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Trim27Q62158 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim27Q62158 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trim27Q62158 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Trim27Q62158 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Gm8213-201ENSMUST00000118191 441 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Mir1894-201ENSMUST00000122802 81 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Gm27892-201ENSMUST00000185017 106 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim27Q62158 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim27Q62158 Gm7653-201ENSMUST00000214567 508 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Gm16372-201ENSMUST00000073088 450 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Gm5356-201ENSMUST00000093326 615 ntBASIC16.13■□□□□ 0.17
Trim27Q62158 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim27Q62158 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms