Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
SspnQ62147 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.07□□□□□ -0.64
SspnQ62147 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.07□□□□□ -0.64
SspnQ62147 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.07□□□□□ -0.64
SspnQ62147 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.07□□□□□ -0.64
SspnQ62147 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.07□□□□□ -0.64
SspnQ62147 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SspnQ62147 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SspnQ62147 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
SspnQ62147 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.07□□□□□ -0.64
SspnQ62147 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SspnQ62147 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SspnQ62147 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.06□□□□□ -0.64
SspnQ62147 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
SspnQ62147 Gm15487-201ENSMUST00000122373 465 ntBASIC11.06□□□□□ -0.64
SspnQ62147 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Gm27306-201ENSMUST00000183970 107 ntBASIC11.06□□□□□ -0.64
SspnQ62147 Mir8102-201ENSMUST00000184148 139 ntBASIC11.06□□□□□ -0.64
SspnQ62147 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SspnQ62147 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SspnQ62147 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.06□□□□□ -0.64
SspnQ62147 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.06□□□□□ -0.64
SspnQ62147 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
SspnQ62147 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SspnQ62147 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.06□□□□□ -0.64
SspnQ62147 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.05□□□□□ -0.64
SspnQ62147 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SspnQ62147 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms