Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm15393-201ENSMUST00000120499 219 ntBASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm27494-201ENSMUST00000184735 189 ntBASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm29541-201ENSMUST00000191351 678 ntBASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mir1895-201ENSMUST00000122615 79 ntBASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm9229-201ENSMUST00000222777 126 ntBASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms