Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Gm15881-201ENSMUST00000148792 942 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Mir6998-201ENSMUST00000183343 64 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Gm45398-201ENSMUST00000210561 165 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Gm14005-208ENSMUST00000223654 681 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps13aQ5H8C4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm4482-201ENSMUST00000200876 742 ntBASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm9132-201ENSMUST00000210182 832 ntBASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps13aQ5H8C4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gm42657-201ENSMUST00000201746 211 ntBASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gm19091-201ENSMUST00000208120 978 ntBASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps13aQ5H8C4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm5621-201ENSMUST00000187303 640 ntBASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm9139-201ENSMUST00000218817 700 ntBASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps13aQ5H8C4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms