Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm17376-201ENSMUST00000166016 84 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm6082-201ENSMUST00000215204 454 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Spire1Q52KF3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Spire1Q52KF3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.39□□□□□ -0.27
Spire1Q52KF3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Gm16570-201ENSMUST00000161951 436 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.38□□□□□ -0.27
Spire1Q52KF3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.38□□□□□ -0.27
Spire1Q52KF3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spire1Q52KF3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms