Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h1Q4VGL6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Gm11793-201ENSMUST00000120433 981 ntBASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Mir7221-201ENSMUST00000184009 72 ntBASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Gm4768-201ENSMUST00000206199 686 ntBASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rc3h1Q4VGL6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h1Q4VGL6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.21■□□□□ 0.02
Rc3h1Q4VGL6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h1Q4VGL6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.21■□□□□ 0.02
Rc3h1Q4VGL6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h1Q4VGL6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm17208-201ENSMUST00000168388 535 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm32025-201ENSMUST00000217960 307 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h1Q4VGL6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Grk6-205ENSMUST00000224653 2976 ntBASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Snord83b-201ENSMUST00000104546 94 ntBASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms