Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.48□□□□□ -0.09
Bbof1Q3V079 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Bbof1Q3V079 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gm11918-201ENSMUST00000121660 179 ntBASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gm11424-201ENSMUST00000121929 829 ntBASIC14.47□□□□□ -0.09
Bbof1Q3V079 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gm9908-201ENSMUST00000211534 448 ntBASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Bbof1Q3V079 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Gm15371-201ENSMUST00000117057 784 ntBASIC14.46□□□□□ -0.09
Bbof1Q3V079 Gm12490-201ENSMUST00000120255 560 ntBASIC14.46□□□□□ -0.09
Bbof1Q3V079 Gm15376-201ENSMUST00000122258 783 ntBASIC14.46□□□□□ -0.09
Bbof1Q3V079 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Gm5161-201ENSMUST00000075243 853 ntBASIC14.46□□□□□ -0.09
Bbof1Q3V079 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Bbof1Q3V079 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Bbof1Q3V079 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Bbof1Q3V079 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms