Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim80Q3V061 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.64□□□□□ -0.23
Trim80Q3V061 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.63□□□□□ -0.23
Trim80Q3V061 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim80Q3V061 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.63□□□□□ -0.23
Trim80Q3V061 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.63□□□□□ -0.23
Trim80Q3V061 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim80Q3V061 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim80Q3V061 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim80Q3V061 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim80Q3V061 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trim80Q3V061 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Gm12859-201ENSMUST00000117834 427 ntBASIC13.62□□□□□ -0.23
Trim80Q3V061 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim80Q3V061 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim80Q3V061 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.62□□□□□ -0.23
Trim80Q3V061 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim80Q3V061 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trim80Q3V061 Matn2-203ENSMUST00000226766 3252 ntBASIC13.62□□□□□ -0.23
Trim80Q3V061 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim80Q3V061 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.62□□□□□ -0.23
Trim80Q3V061 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim80Q3V061 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim80Q3V061 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim80Q3V061 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim80Q3V061 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms