Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc27Q3V036 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm18905-201ENSMUST00000205454 928 ntBASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.8■□□□□ 0.28
Ccdc27Q3V036 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Gm27989-201ENSMUST00000184721 107 ntBASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc27Q3V036 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc27Q3V036 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms