Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b2Q3UJB0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Sf3b2Q3UJB0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.93■□□□□ 0.3
Sf3b2Q3UJB0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b2Q3UJB0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b2Q3UJB0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Gm11675-201ENSMUST00000121873 832 ntBASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b2Q3UJB0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gm19353-201ENSMUST00000184561 445 ntBASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gm32999-201ENSMUST00000192693 562 ntBASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b2Q3UJB0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Gm6963-201ENSMUST00000147879 379 ntBASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Gm37666-201ENSMUST00000194110 866 ntBASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sf3b2Q3UJB0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.89■□□□□ 0.3
Sf3b2Q3UJB0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.3
Sf3b2Q3UJB0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.89■□□□□ 0.3
Sf3b2Q3UJB0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3b2Q3UJB0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3b2Q3UJB0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC16.89■□□□□ 0.29
Sf3b2Q3UJB0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sf3b2Q3UJB0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms