Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim7Q3TJD7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.69□□□□□ -0.06
Pdlim7Q3TJD7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim7Q3TJD7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim7Q3TJD7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim7Q3TJD7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Gm8712-201ENSMUST00000221090 701 ntBASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdlim7Q3TJD7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Gm7467-201ENSMUST00000185173 652 ntBASIC14.66□□□□□ -0.06
Pdlim7Q3TJD7 Gm37835-201ENSMUST00000193305 361 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms