Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Thbs3Q05895 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Thbs3Q05895 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm14350-201ENSMUST00000116642 640 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm15806-201ENSMUST00000120696 955 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm12138-201ENSMUST00000122180 951 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm44069-201ENSMUST00000204898 506 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.58□□□□□ -0.56
Thbs3Q05895 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Thbs3Q05895 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Thbs3Q05895 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Thbs3Q05895 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.57□□□□□ -0.56
Thbs3Q05895 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.57□□□□□ -0.56
Thbs3Q05895 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Mir1894-201ENSMUST00000122802 81 ntBASIC11.57□□□□□ -0.56
Thbs3Q05895 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Thbs3Q05895 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.57□□□□□ -0.56
Thbs3Q05895 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.57□□□□□ -0.56
Thbs3Q05895 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Thbs3Q05895 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thbs3Q05895 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Thbs3Q05895 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.56□□□□□ -0.56
Thbs3Q05895 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Thbs3Q05895 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Thbs3Q05895 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Thbs3Q05895 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Gm6244-201ENSMUST00000178732 841 ntBASIC11.56□□□□□ -0.56
Thbs3Q05895 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thbs3Q05895 Gm27892-201ENSMUST00000185017 106 ntBASIC11.56□□□□□ -0.56
Thbs3Q05895 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.56□□□□□ -0.56
Thbs3Q05895 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.56□□□□□ -0.56
Thbs3Q05895 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.56□□□□□ -0.56
Thbs3Q05895 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.56□□□□□ -0.56
Thbs3Q05895 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Thbs3Q05895 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms