Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.03□□□□□ -0.32
Col9a1Q05722 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm42822-201ENSMUST00000200507 1529 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.03□□□□□ -0.32
Col9a1Q05722 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a1Q05722 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Col9a1Q05722 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Col9a1Q05722 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.02□□□□□ -0.32
Col9a1Q05722 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col9a1Q05722 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Col9a1Q05722 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm12502-201ENSMUST00000120197 444 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm15881-201ENSMUST00000148792 942 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Mir6546-201ENSMUST00000184460 62 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.02□□□□□ -0.33
Col9a1Q05722 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm42518-201ENSMUST00000196277 938 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.02□□□□□ -0.33
Col9a1Q05722 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col9a1Q05722 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col9a1Q05722 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Col9a1Q05722 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm12218-201ENSMUST00000117666 399 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm13487-201ENSMUST00000122240 864 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm22442-201ENSMUST00000157256 144 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm3650-201ENSMUST00000180600 747 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Col9a1Q05722 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.01□□□□□ -0.33
Col9a1Q05722 AC154634.2-201ENSMUST00000225983 1184 ntBASIC13.01□□□□□ -0.33
Col9a1Q05722 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col9a1Q05722 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms